Gene, Cell and Tissue

Published by: Kowsar

Comparison of PCR-RFLP Based on Ribosomal Regions and SSR Markers in Genetic Diversity of Pistachio Die-Back Caused by Paecilomyces variotii

Fatemeh Rostami 1 , * , Fatemeh Khosravi Moghaddam 1 , Seyed Kazem Sabbagh 1 and Saeide Saeidi 2 , *
Authors Information
1 Department of Plant Protection, Zabol University, Zabol, IR Iran
2 Department of Biology, Science and Research Branch, Islamic Azad University, Kerman, IR Iran
Corresponding Authors:
Article information
  • Gene, Cell and Tissue: January 01, 2015, 2 (1); e24340
  • Published Online: January 21, 2015
  • Article Type: Research Article
  • Received: October 5, 2014
  • Revised: December 5, 2014
  • Accepted: December 6, 2014
  • DOI: 10.17795/gct-24340

To Cite: Rostami F, Khosravi Moghaddam F, Sabbagh S K, Saeidi S. Comparison of PCR-RFLP Based on Ribosomal Regions and SSR Markers in Genetic Diversity of Pistachio Die-Back Caused by Paecilomyces variotii, Gene Cell Tissue. 2015 ; 2(1):e24340. doi: 10.17795/gct-24340.

Abstract
Copyright © 2015, Zahedan University of Medical Sciences. This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International License (http://creativecommons.org/licenses/by-nc/4.0/) which permits copy and redistribute the material just in noncommercial usages, provided the original work is properly cited.
1. Background
2. Objectives
3. Materials and Methods
4. Results
5. Discussion
Footnotes
References
  • 1. Baradaran GR, Ghasemi A. IntroducingBacillus licheniformisas the causal agent of pistachio dieback in Iran. Arch Phytopathol Pfl. 2010; 43(6): 597-601[DOI]
  • 2. Cantone FA, Vandenberg JD. Intraspecific diversity in Paecilomyces fumosoroseus. Mycol Res. 1998; 102(2): 209-15[DOI]
  • 3. Dietrich W, Katz H, Lincoln SE, Shin HS, Friedman J, Dracopoli NC, et al. A genetic map of the mouse suitable for typing intraspecific crosses. Genetics. 1992; 131(2): 423-47[PubMed]
  • 4. Hamada H, Petrino MG, Kakunaga T. A novel repeated element with Z-DNA-forming potential is widely found in evolutionarily diverse eukaryotic genomes. Proc Natl Acad Sci U S A. 1982; 79(21): 6465-9[PubMed]
  • 5. Weber JL, May PE. Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction. Am J Hum Genet. 1989; 44(3): 388-96[PubMed]
  • 6. Falahati Rastgar M, Taheri P, Jafarpoor B, Rohani H, Mahdikhani Moghadam A. Identification of different groups taxonomic of beet root rot fungus Rhizoctonia spp analysis with rDNA-ITS and PCR-RFLP. J Plant Prot. 2010; 24(3): 293-85
  • 7. Tautz D, Renz M. Simple sequences are ubiquitous repetitive components of eukaryotic genomes. Nucleic Acids Res. 1984; 12(10): 4127-38[PubMed]
  • 8. Tautz D, Trick M, Dover GA. Cryptic simplicity in DNA is a major source of genetic variation. Nature. 1986; 322(6080): 652-6[DOI][PubMed]
  • 9. Paecilomyces marquandii an endophytic fungal species isolated from pistachio. Proceedings of the twentieth Iranian Plant Protection Congress, 7-4 Shiraz Persian date Shahrivar. : 473
  • 10. Yanna W, Laifa W, Chungen P, Yong L,, Guozhong T. Intraspecific Polymorphism in Paecilomyces lilacinus by Analysis of RAPD. Chinese Agr Sci Bull. 2006; 3: 15-24
  • 11. Dalleau-Clouet C, Gauthier N, Risterucci AM, Bon MC, Fargues J. Isolation and characterization of microsatellite loci from the entomopathogenic hyphomycete, Paecilomyces fumosoroseus. Mol Ecol Notes. 2005; 5(3): 496-8[DOI]
  • 12. Lubeck M, Poulsen SK, Lubeck PS, Jensen DF, Thrane U. Identification of Trichoderma strains from building materials by ITS1 ribotyping, UP-PCR fingerprinting and UP-PCR cross hybridization. FEMS Microbiol Lett. 2000; 185(2): 129-34[PubMed]
  • 13. Safai N, Mehdizadeh V. Phylogenetic analysis and population genetics education software. 2013; : 352
  • 14. Powell W, Morgante M, Andre C, Hanafey M, Vogel J, Tingey S, et al. The comparison of RFLP, RAPD, AFLP and SSR (microsatellite) markers for germplasm analysis. Mol Breeding. 1996; 2(3): 225-38[DOI]
  • 15. Esselman EJ, Jianqiang L, Crawford DJ, Windus JL, Wolfe AD. Clonal diversity in the rareCalamagrostis porterissp.insperata(Poaceae): comparative results for allozymes and random amplified polymorphic DNA (RAPD) and intersimple sequence repeat (ISSR) markers. Mol Ecol. 1999; 8(3): 443-51[DOI]
  • 16. Houbraken J, Varga J, Rico-Munoz E, Johnson S, Samson RA. Sexual reproduction as the cause of heat resistance in the food spoilage fungus Byssochlamys spectabilis (anamorph Paecilomyces variotii). Appl Environ Microbiol. 2008; 74(5): 1613-9[DOI][PubMed]
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